BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB031B09SP1|AL429345
(975 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1461 1616 0.0
3x_Contig1530 627 e-179
3x_Contig18 478 e-135
>3x_Contig1461
Length = 5478
Score = 1616 bits (814), Expect = 0.0
Identities = 923/956 (96%), Gaps = 3/956 (0%)
Strand = Plus / Plus
Query: 1 atccggttgaaaaccagtgcgcgacataaagtcggaccggacaaccagacccaaagttca 60
|||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1347 atccggttgataaccagtgcgcgacataaagtcggaccggacaaccagacccaaagttca 1406
Query: 61 actacgagctttttaactgcaacaactttaatatacgctactggagckggaattaccgcg 120
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 1407 actacgagctttttaactgcaacaactttaatatacgctactggagctggaattaccgcg 1466
Query: 121 gctgctggcaccagacttgccctccagttgttcctcgttaaggtatttacattgtactca 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1467 gctgctggcaccagacttgccctccagttgttcctcgttaaggtatttacattgtactca 1526
Query: 181 ttccaattacaagacccgaatgggccctgtatcgttatttattgtcactacctccctgaa 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1527 ttccaattacaagacccgaatgggccctgtatcgttatttattgtcactacctccctgaa 1586
Query: 241 ttaggattgggtaatttgcgcgcctgctgccttccttggatgtggtagccgtttctcagg 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1587 ttaggattgggtaatttgcgcgcctgctgccttccttggatgtggtagccgtttctcagg 1646
Query: 301 ctccctctccggaatcgaacccttattccccgttacccgttgaaaccatggtaggccact 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1647 ctccctctccggaatcgaacccttattccccgttacccgttgaaaccatggtaggccact 1706
Query: 361 atcctaccatcgaaagttgatagggcagaaatttgaatgaaccatcgccagcacaaggcc 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1707 atcctaccatcgaaagttgatagggcagaaatttgaatgaaccatcgccagcacaaggcc 1766
Query: 421 atgcgattcgaaaagttattatgaatcatcaaggagtccgaagacattgattttttatct 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1767 atgcgattcgaaaagttattatgaatcatcaaggagtccgaagacattgattttttatct 1826
Query: 481 aataaatacatctcttccaaagggtcgagattttaagcatgtattagctctagaattacc 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1827 aataaatacatctcttccaaagggtcgagattttaagcatgtattagctctagaattacc 1886
Query: 541 acagatatccatgtagtaaaggaactatcaaataaacgataactgatttaatgagccatt 600
|||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 1887 acagatatccatgtagtaaaggaactatcaaataaacgataactgatttaatgacccatt 1946
Query: 601 cgcagtttcactgtataaattgcttatacttagacatgcatggcttaatctttgagacaa 660
|||| ||||||||||||||||||||||||||| |||||||| ||||||||||| | ||||
Sbjct: 1947 cgca-tttcactgtataaattgcttatacttatacatgcattgcttaatcttttatacaa 2005
Query: 661 gcatatgactactggcaggatcaaccagataactatcttatgaagcagtatccacaagtc 720
|||||| |||||| ||| ||||||||| |||| |||||||||||||||||||||||| ||
Sbjct: 2006 gcatataactactcgcaagatcaaccaaataaatatcttatgaagcagtatccacaattc 2065
Query: 721 ttaacaacaaatgctgtcaagtcccgcatcaactgtcgcagatattttatcatgattaga 780
||||||||||||||| |||| ||||||||||||| ||||| |||||||||||| |||| |
Sbjct: 2066 ttaacaacaaatgctctcaactcccgcatcaactttcgcatatattttatcattattata 2125
Query: 781 aatgcaagtaaggaaacaagtttccatactcgcgtcggaagcaacaattcaacagttttt 840
||||||||||||||||||| ||||||||||||| || ||||||||||||||||||||||
Sbjct: 2126 aatgcaagtaaggaaacaattttccatactcgcttcaaaagcaacaattcaacagttttt 2185
Query: 841 acactatcaaatcatcacaacccctccatgccatagcactctttgagtttcctctaaccg 900
||||||||||||||||||||||||||||| |||||||||||||| | ||||||||||||
Sbjct: 2186 acactatcaaatcatcacaacccctccattccatagcactctttaattttcctctaacca 2245
Query: 901 acttccactgaacactgctccgatgtttcgcagaaa-ag-aacgttcaatatcatc 954
||||||||||||||||||||| || ||||||| ||| || ||||||||||||||||
Sbjct: 2246 acttccactgaacactgctccaatttttcgcaaaaacagaaacgttcaatatcatc 2301
>3x_Contig1530
Length = 6216
Score = 627 bits (316), Expect = e-179
Identities = 317/318 (99%)
Strand = Plus / Minus
Query: 1 atccggttgaaaaccagtgcgcgacataaagtcggaccggacaaccagacccaaagttca 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 331 atccggttgaaaaccagtgcgcgacataaagtcggaccggacaaccagacccaaagttca 272
Query: 61 actacgagctttttaactgcaacaactttaatatacgctactggagckggaattaccgcg 120
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 271 actacgagctttttaactgcaacaactttaatatacgctactggagctggaattaccgcg 212
Query: 121 gctgctggcaccagacttgccctccagttgttcctcgttaaggtatttacattgtactca 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 211 gctgctggcaccagacttgccctccagttgttcctcgttaaggtatttacattgtactca 152
Query: 181 ttccaattacaagacccgaatgggccctgtatcgttatttattgtcactacctccctgaa 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 151 ttccaattacaagacccgaatgggccctgtatcgttatttattgtcactacctccctgaa 92
Query: 241 ttaggattgggtaatttgcgcgcctgctgccttccttggatgtggtagccgtttctcagg 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 91 ttaggattgggtaatttgcgcgcctgctgccttccttggatgtggtagccgtttctcagg 32
Query: 301 ctccctctccggaatcga 318
||||||||||||||||||
Sbjct: 31 ctccctctccggaatcga 14
>3x_Contig18
Length = 1116
Score = 478 bits (241), Expect = e-135
Identities = 248/249 (99%), Gaps = 1/249 (0%)
Strand = Plus / Minus
Query: 369 atcgaaagttgatagggcagaaatttgaatgaaccatcgccagcacaaggccatgcgatt 428
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 286 atcgaaagttgatagggcagaaatttgaatgaaccatcgccagcacaaggccatgcgatt 227
Query: 429 cgaaaagttattatgaatcatcaaggagtccgaagacattgattttttatctaataaata 488
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 226 cgaaaagttattatgaatcatcaaggagtccgaagacattgattttttatctaataaata 167
Query: 489 catctcttccaaagggtcgagattttaagcatgtattagctctagaattaccacagatat 548
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 166 catctcttccaaagggtcgagattttaagcatgtattagctctagaattaccacagatat 107
Query: 549 ccatgtagtaaaggaactatcaaataaacgataactgatttaatgagccattcgcagttt 608
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 106 ccatgtagtaaaggaactatcaaataaacgataactgatttaatgagccattcgca-ttt 48
Query: 609 cactgtata 617
|||||||||
Sbjct: 47 cactgtata 39
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5795
Number of Sequences: 1807
Number of extensions: 5795
Number of successful extensions: 33
Number of sequences better than 1.0e-20: 3
length of query: 975
length of database: 10,358,551
effective HSP length: 16
effective length of query: 959
effective length of database: 10,329,639
effective search space: 9906123801
effective search space used: 9906123801
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.3 bits)
S2: 50 (99.7 bits)